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Recent Publications


Hasan NA, Choi SY, Eppinger M, Clark PW, Chen A, Alam M, Haley BJ, Taviani E, Hine E, Su Q, Tallon LJ, Prosper JB, Furth K, Hoq MM, Li H, Fraser-Liggett CM, Cravioto A, Huq A, Ravel J, Cebula TA, Colwell RR.

Genomic diversity of 2010 Haitian cholera outbreak strains, Proc Natl Acad Sci U S A. 2012 Jun 18

Hazen TH, Sahl JW, Redman JC, Morris CR, Daugherty SC, Chibucos MC, Sengamalay NA, Fraser-Liggett CM, Steinsland H, Whittam TS, Whittam B, Manning SD, Rasko DA.

Draft Genome Sequences of the Diarrheagenic Escherichia coli Collection, J Bacteriol. 2012 Jun

Sahl JW, Matalka MN, Rasko DA.

Phylomark: a tool to identify conserved phylogenetic markers from whole-genome alignments, Appl Environ Microbiol. 2012 May 11

Eppinger M, Radnedge L, Andersen G, Vietri N, Severson G, Mou S, Ravel J, Worsham PL.

Novel Plasmids and Resistance Phenotypes in Yersinia pestis: Unique Plasmid Inventory of Strain Java 9 Mediates High Levels of Arsenic Resistance, PLoS One. 2012 Mar 30

JW Sahl, DA Rasko

Analysis of the global transcriptional profiles of enterotoxigenic Escherichia coli (ETEC) isolate E24377A., Infection and immunity. 3 Jan, 2012

M Eppinger, MK Mammel, JE Leclerc, J Ravel, TA Cebula

Genomic anatomy of Escherichia coli O157:H7 outbreaks., Proceedings of the National Academy of Sciences of the United States of America. 13 Dec, 2011

M Eppinger, MK Mammel, JE Leclerc, J Ravel, TA Cebula

Genome signatures of Escherichia coli O157:H7 isolates from the bovine host reservoir., Applied and environmental microbiology. May, 2011

K Galens, J Orvis, S Daugherty, HH Creasy, S Angiuoli, O White, J Wortman, A Mahurkar, MG Giglio

The IGS Standard Operating Procedure for Automated Prokaryotic Annotation., Standards in genomic sciences. 29 Apr, 2011

JW Sahl, H Steinsland, JC Redman, SV Angiuoli, JP Nataro, H Sommerfelt, DA Rasko

A comparative genomic analysis of diverse clonal types of enterotoxigenic Escherichia coli reveals pathovar-specific conservation.,Infection and immunity. Feb, 2011